CDS

Accession Number TCMCG051C27787
gbkey CDS
Protein Id XP_002313362.2
Location complement(join(5417257..5417376,5418444..5418555,5418671..5418849,5419069..5419368,5420696..5421196,5421829..5421967,5422823..5422941,5423079..5423147,5423901..5423985,5424581..5424651,5425333..5425532,5426328..5426394,5426648..5426779,5427760..5427936,5428231..5428293,5428768..5428839,5430022..5430078,5430233..5430292,5430403..5430486))
Gene LOC7482342
GeneID 7482342
Organism Populus trichocarpa

Protein

Length 868aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_002313326.3
Definition nuclear cap-binding protein subunit 1 isoform X2 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category A
Description Nuclear cap-binding protein subunit
KEGG_TC -
KEGG_Module M00399        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12882        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
ko03015        [VIEW IN KEGG]
ko03040        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000184        [VIEW IN EMBL-EBI]
GO:0000339        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000394        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0000956        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005845        [VIEW IN EMBL-EBI]
GO:0005846        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006406        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009648        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010228        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031050        [VIEW IN EMBL-EBI]
GO:0031053        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034518        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0035195        [VIEW IN EMBL-EBI]
GO:0035196        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043331        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048571        [VIEW IN EMBL-EBI]
GO:0048573        [VIEW IN EMBL-EBI]
GO:0048574        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051028        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070918        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071359        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071427        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGCAGCTGGAGAAGTCTCCTTCTTCGAATCGGCGACAACTGCCCCGACTATGGCACCAGCTCCGACTTCAAAGAACACATTGAAACTTGCTTCGGTGTTATTCGGCGAGAGTTGGAGCACTCTTCTAACGATATTTTATCTTTCCTTCTCCAGTGTGCTGAACAGTTGCCTCACAAGATTCCTTTATATGGAACTTTGGTTGGCCTATTGAACTTGGAGAATGAGGACTTCGTGAAGCAAATGGTGGAGGCAACTCAAGCTAATTTTCAGGATGCCCTAGATTTTGGAAACTGTGACATGATTCGCATTTTGATGCGCTTTCTTACTGTTATGATGTGCAGTAAAGTTCTCCAACCTTCTTCTCTGGTAGTTGTCTTTGAAACACTCTTATCATCTGCTGCCACAACATTGGATGAAGAGAAAGGAAATCCTTCCTGGCAAGCCCGTGGGGACTTTTATGTAAGCTGCATTTTATCCTGTCTTCCATGGGGAGGATCAGAGCTTGTTGAGCAAGTTCCTGAGGAGATTGAGAGCGTCATGGTTGGTATAGAAGCTTATTTGAGCATTAGAAGGCATAATTCTGATACCGGATTGTCTTTTTTTGAGGATGATGATGAATCTGGGAGGGCTGTTGTTGAGAAGGATTTCTTGGAAGATTTATGGGGTCGGATTCAAGTACTATCTAGCAATGGATGGAAAGTAGACAGTGTACCCAGACCTCATCTCTCGTTTGAAGCTCAGCTGGTTGCTGGGAAGTCTCATGAGTTCGGGCCCATCAACACTCCTGAGCAACCTGAGCCACTTTCAGAAGTCTCTGGGGTACTTTATGGTAAACAGAAGCATGATGCAGAGTTAAAGTATCCTCAAAGGATACGCAGGCTTAATATATTTCCCGCGAGTAAAATTGAGGATATGCAACCCATAGATCGCTTCATTGTGGAAGAGTACTTGCTGGATGTACTTTTGTTCCTCAATGGATGTCGAAAGGAATGTGCTTCGTTCATGGTTGGCCTGCCTGTACCATTTCGTTACGACTATCTCATGGCAGAGACAATTTTCTCTCAGTTACTTTTGCTACCATTACCACCTTTCAAGCCAATATATTACACACTTGTGATAATGGACCTTTGTAAGGCTCTTCCTGGAGCCTTCCCTGGAGTTGTAGCTGGTGCAGTTCGTGCACTTTTTGAGAAAATAGCTGATTTAGATACGGAGTGTCAGACAAGGCTCATCCTTTGGTTTTCACACCATCTGTCAAACTTTCAATTCATCTGGCCATGGGAAGAGTGGGCTTTTGTTTTAGACCTACCTAAGTGGGCCCCACAGCGTGTGTTTGTTCAAGAGGTCTTGGAAAGAGAAGTCCGTCTGTCATACTGGGACAAAGTTAAGCAGAGCATTGAGAATGCACCTGCTTTAGAAGAGTTGCTTCCACCAAAGGGTAGTCCAAACTTTATATACAGCATCGAAGATGGTAGAGAAAAAACTGAGCAGCATGCTTTGTCTGCAGAGCTCAACAACAAGGTGAAGGCAAGGCAAACTGCTCGAGAAATAATCTCATGGGTAGAAGAAAGTGTAGTTCCTAATCATGGTTGGGACGTCGCCCTTAAAGTGGTTGTACATACCCTTCTTGAAATCGGTTCTAAAAGTTTCACTCATTTGATCACTGTTTTGGAGAGATATGGCCAAGTATTTGCACGAATTTGTCCTGATCATGATAAGCAGGTCATGCTGATAGCTGAAGTTAGTTCATATTGGAAGAACAATGCTCAAATGACTGCCATAGCAATTGACAGAATGATGGGTTATCGACTAATTTCTAATTTGGCAATTGTGAGATGGGTATTTTCTCCAGCAAACATTGAGCAATTTCATACATCTGATCGTCCATGGGAGGTTCTTAGAAATGCTATCAGCAAGACTTATAACCGTATATCTGATCTAAGAAACGAGATATCATCTCTTAAGAAGAGTGTTGTATCAGCTGAAGAAGCAGCGACAAAGGCAAAAACAGAGTTAGATGCTGCTGAGTCAAAGCTCTCTCTTGTGGATGGTGAGCCTGTTCTTGGTGATAACCCTGCGAGGTTGAAGCGCTTGAAAGCAAATGCTGAAAAGGCAAAAGAAGAAGAGGTGTCTGTGCATGAGTCTTTGGAGGCCAAGGAGGCTCTTCTTGCTCGTGCCCTTGATGAAAATGAGGCATTGTTCCTCTCTTTGTACAAAAACTTCTCAAATGTGTTGATGGAACGTCTACCTGATCCATCTAGAGCTCGAACATTGCGGGAATTAAAGTCAATTCAAGCAGATGAAATGACCGTTGATCTCGATGAATCATCAGTAATGGAAGTGGATAATGAGAGTGGGAGACCCAACAAAAGTCAGTCGAATGGAGGAAAGGAAAGCAACATCTATAATGTGGGAGAGAAAGAGCAATGGTGTTTATCAACTCTCGGCTATGTCAAGGCCTTTGCAAGACAGTATGCTTCTGAGATATGGGCTCACATCGAGAAGCTAGATGCAGATGTATTCACAGAAAATGTGCATCCTCTTTTCAAGAAAGCAGTTTATTCTGGTTTGAGTCGGCCAATCAATGATGTGTCATCTGGCTAA
Protein:  
MSSWRSLLLRIGDNCPDYGTSSDFKEHIETCFGVIRRELEHSSNDILSFLLQCAEQLPHKIPLYGTLVGLLNLENEDFVKQMVEATQANFQDALDFGNCDMIRILMRFLTVMMCSKVLQPSSLVVVFETLLSSAATTLDEEKGNPSWQARGDFYVSCILSCLPWGGSELVEQVPEEIESVMVGIEAYLSIRRHNSDTGLSFFEDDDESGRAVVEKDFLEDLWGRIQVLSSNGWKVDSVPRPHLSFEAQLVAGKSHEFGPINTPEQPEPLSEVSGVLYGKQKHDAELKYPQRIRRLNIFPASKIEDMQPIDRFIVEEYLLDVLLFLNGCRKECASFMVGLPVPFRYDYLMAETIFSQLLLLPLPPFKPIYYTLVIMDLCKALPGAFPGVVAGAVRALFEKIADLDTECQTRLILWFSHHLSNFQFIWPWEEWAFVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPALEELLPPKGSPNFIYSIEDGREKTEQHALSAELNNKVKARQTAREIISWVEESVVPNHGWDVALKVVVHTLLEIGSKSFTHLITVLERYGQVFARICPDHDKQVMLIAEVSSYWKNNAQMTAIAIDRMMGYRLISNLAIVRWVFSPANIEQFHTSDRPWEVLRNAISKTYNRISDLRNEISSLKKSVVSAEEAATKAKTELDAAESKLSLVDGEPVLGDNPARLKRLKANAEKAKEEEVSVHESLEAKEALLARALDENEALFLSLYKNFSNVLMERLPDPSRARTLRELKSIQADEMTVDLDESSVMEVDNESGRPNKSQSNGGKESNIYNVGEKEQWCLSTLGYVKAFARQYASEIWAHIEKLDADVFTENVHPLFKKAVYSGLSRPINDVSSG